Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
HACD3Q9P035 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.84■□□□□ 0.29
HACD3Q9P035 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.84■□□□□ 0.29
HACD3Q9P035 AL031432.2-201ENST00000566714 459 ntBASIC16.84■□□□□ 0.29
HACD3Q9P035 AL928711.1-201ENST00000570165 459 ntBASIC16.84■□□□□ 0.29
HACD3Q9P035 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.84■□□□□ 0.29
HACD3Q9P035 AC064836.3-201ENST00000607928 673 ntBASIC16.84■□□□□ 0.29
HACD3Q9P035 AC027601.4-201ENST00000611259 610 ntBASIC16.84■□□□□ 0.29
HACD3Q9P035 AC010507.1-201ENST00000633895 436 ntBASIC16.84■□□□□ 0.29
HACD3Q9P035 KRT8P39-201ENST00000396270 1433 ntBASIC16.84■□□□□ 0.29
HACD3Q9P035 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HACD3Q9P035 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HACD3Q9P035 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
HACD3Q9P035 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.84■□□□□ 0.29
HACD3Q9P035 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
HACD3Q9P035 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HACD3Q9P035 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HACD3Q9P035 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HACD3Q9P035 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HACD3Q9P035 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HACD3Q9P035 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HACD3Q9P035 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HACD3Q9P035 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HACD3Q9P035 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.83■□□□□ 0.28
HACD3Q9P035 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HACD3Q9P035 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.83■□□□□ 0.28
HACD3Q9P035 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.83■□□□□ 0.28
HACD3Q9P035 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.83■□□□□ 0.28
HACD3Q9P035 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.83■□□□□ 0.28
HACD3Q9P035 SLC25A1P1-201ENST00000528351 927 ntBASIC16.83■□□□□ 0.28
HACD3Q9P035 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.83■□□□□ 0.28
HACD3Q9P035 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.83■□□□□ 0.28
HACD3Q9P035 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.83■□□□□ 0.28
HACD3Q9P035 AC023141.13-201ENST00000604991 943 ntBASIC16.83■□□□□ 0.28
HACD3Q9P035 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 FAM197Y3-203ENST00000618346 717 ntBASIC16.83■□□□□ 0.28
HACD3Q9P035 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
HACD3Q9P035 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HACD3Q9P035 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HACD3Q9P035 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HACD3Q9P035 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HACD3Q9P035 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.82■□□□□ 0.28
HACD3Q9P035 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.82■□□□□ 0.28
HACD3Q9P035 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HACD3Q9P035 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.82■□□□□ 0.28
HACD3Q9P035 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.82■□□□□ 0.28
HACD3Q9P035 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.82■□□□□ 0.28
HACD3Q9P035 RNA5SP416-201ENST00000516838 111 ntBASIC16.82■□□□□ 0.28
HACD3Q9P035 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
HACD3Q9P035 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.82■□□□□ 0.28
HACD3Q9P035 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HACD3Q9P035 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.82■□□□□ 0.28
HACD3Q9P035 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.82■□□□□ 0.28
HACD3Q9P035 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.82■□□□□ 0.28
HACD3Q9P035 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms