Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AL031731.1-201ENST00000642131 2094 ntBASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 KRT17P7-201ENST00000451704 1104 ntBASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 RN7SL618P-201ENST00000477850 296 ntBASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AC140912.1-201ENST00000577171 1054 ntBASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 CU639417.3-201ENST00000624240 1404 ntBASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1R1Q9NWW0 AL023806.1-201ENST00000603994 1649 ntBASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 SPDYE19P-201ENST00000338590 713 ntBASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 DGCR5-201ENST00000399539 862 ntBASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 AL353779.1-201ENST00000434793 351 ntBASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 AC061975.2-201ENST00000581722 295 ntBASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 AL139011.1-202ENST00000642063 584 ntBASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 GPAA1P2-202ENST00000606848 1787 ntBASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1R1Q9NWW0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms