Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 AC074386.1-202ENST00000463561 864 ntBASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 KRT19P2-202ENST00000557173 1012 ntBASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 MIR4492-201ENST00000581627 80 ntBASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 AL391256.1-201ENST00000443260 1855 ntBASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PARPBPQ9NWS1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 AC022211.2-201ENST00000585075 2527 ntBASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 PDPK2P-202ENST00000562415 1191 ntBASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 CYP2A7P1-201ENST00000595391 815 ntBASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 MTDHP5-201ENST00000598980 586 ntBASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PARPBPQ9NWS1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PARPBPQ9NWS1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms