Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 HLA-J-202ENST00000469281 1241 ntBASIC17.85■□□□□ 0.45
NXF3Q9H4D5 AC098859.1-201ENST00000502915 1238 ntBASIC17.85■□□□□ 0.45
NXF3Q9H4D5 RNA5SP421-201ENST00000516864 134 ntBASIC17.85■□□□□ 0.45
NXF3Q9H4D5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 AC020765.3-201ENST00000613051 740 ntBASIC17.85■□□□□ 0.45
NXF3Q9H4D5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 INGX-202ENST00000489074 768 ntBASIC17.84■□□□□ 0.45
NXF3Q9H4D5 RNA5SP410-201ENST00000516285 106 ntBASIC17.84■□□□□ 0.45
NXF3Q9H4D5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 SPDYE12P-201ENST00000618416 771 ntBASIC17.84■□□□□ 0.45
NXF3Q9H4D5 AJ011932.1-201ENST00000621707 465 ntBASIC17.84■□□□□ 0.45
NXF3Q9H4D5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NXF3Q9H4D5 AC022211.2-201ENST00000585075 2527 ntBASIC17.83■□□□□ 0.45
NXF3Q9H4D5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NXF3Q9H4D5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
NXF3Q9H4D5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
NXF3Q9H4D5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NXF3Q9H4D5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
NXF3Q9H4D5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.83■□□□□ 0.45
NXF3Q9H4D5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.83■□□□□ 0.45
NXF3Q9H4D5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 UGT1A2P-201ENST00000454886 866 ntBASIC17.83■□□□□ 0.44
NXF3Q9H4D5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NXF3Q9H4D5 MIR4745-201ENST00000577608 62 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms