Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 GGT3P-204ENST00000453783 1664 ntBASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AGGF1P2-201ENST00000426656 2106 ntBASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AC092171.3-201ENST00000610122 2651 ntBASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 GPS2P2-201ENST00000430745 888 ntBASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AC105233.2-201ENST00000523697 349 ntBASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AF228730.5-201ENST00000530288 346 ntBASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 LINC00628-201ENST00000628516 1289 ntBASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
POLR3FQ9H1D9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 MIR346-201ENST00000362234 95 ntBASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 AC142381.1-201ENST00000426099 345 ntBASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 HLA-J-203ENST00000494367 1087 ntBASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 AC073389.1-201ENST00000595595 795 ntBASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 AC084121.4-201ENST00000641598 221 ntBASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 AF228730.8-201ENST00000642140 221 ntBASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
POLR3FQ9H1D9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 RBPMS2P1-201ENST00000437762 623 ntBASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 AC004449.1-201ENST00000564240 433 ntBASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.23■□□□□ 0.51
POLR3FQ9H1D9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3FQ9H1D9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
POLR3FQ9H1D9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3FQ9H1D9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3FQ9H1D9 PCGF3-213ENST00000620529 1899 ntBASIC18.22■□□□□ 0.51
POLR3FQ9H1D9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3FQ9H1D9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
POLR3FQ9H1D9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3FQ9H1D9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR3FQ9H1D9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms