Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 AC018695.7-201ENST00000624587 2492 ntBASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 MED15P5-201ENST00000423150 992 ntBASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 AC068137.2-201ENST00000605408 478 ntBASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 AC092865.6-201ENST00000642101 219 ntBASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCSER1Q9C0I3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 AC005622.1-201ENST00000636801 1703 ntBASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 AP002472.1-201ENST00000577490 586 ntBASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 AL078644.1-201ENST00000609881 752 ntBASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCSER1Q9C0I3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.53■□□□□ 0.56
CCSER1Q9C0I3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms