Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 HCG4-201ENST00000418983 998 ntBASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 AC005412.3-201ENST00000580309 715 ntBASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 AP001350.2-201ENST00000625104 1094 ntBASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 CDC14C-201ENST00000428251 1719 ntBASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 AC112504.1-201ENST00000623415 1841 ntBASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 AC107918.2-201ENST00000530817 355 ntBASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 AC087641.1-201ENST00000557561 1021 ntBASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 PGM5P2-202ENST00000637225 1043 ntBASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 AC092384.3-202ENST00000564646 2873 ntBASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PHACTR1Q9C0D0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 PAUPAR-201ENST00000630360 2965 ntBASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 PMS2P1-201ENST00000431037 1228 ntBASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 SLC25A6P2-201ENST00000497974 877 ntBASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms