Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 HCG4-201ENST00000418983 998 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AC142381.1-201ENST00000426099 345 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 KLF2P3-201ENST00000451977 1087 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 CCDC74BP1-201ENST00000508880 1123 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AC097493.3-201ENST00000509725 367 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 FAM86C2P-203ENST00000528684 1004 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AC109635.5-201ENST00000533593 962 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 MIR3197-201ENST00000582241 73 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AC138761.1-201ENST00000584393 385 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AC011467.4-201ENST00000594891 528 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AL161645.1-201ENST00000622716 1255 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AC084018.2-201ENST00000613093 2607 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AKAP8P1-201ENST00000434743 1349 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AL021920.2-201ENST00000624828 1351 ntBASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
KRTAP4-3Q9BYR4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AC073439.1-201ENST00000624121 1774 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms