Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHANK2-AS3Q9BTD1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHANK2-AS3Q9BTD1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.83□□□□□ -0.36
SHANK2-AS3Q9BTD1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.83□□□□□ -0.36
SHANK2-AS3Q9BTD1 PCGF3-213ENST00000620529 1899 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 PI4KAP1-204ENST00000612579 1703 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC132872.4-202ENST00000622924 2756 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC024909.3-201ENST00000611513 2257 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 AL603832.2-201ENST00000566195 2125 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 GPAA1P2-202ENST00000606848 1787 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 PTCHD3P3-201ENST00000403073 906 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 FOSL1P1-201ENST00000511041 816 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 CYP2A7P1-201ENST00000595391 815 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 AL355877.3-201ENST00000622820 899 ntBASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHANK2-AS3Q9BTD1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 PAUPAR-201ENST00000630360 2965 ntBASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 AL353732.1-201ENST00000569618 1459 ntBASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 MTDHP4-201ENST00000600287 670 ntBASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 AP001350.2-201ENST00000625104 1094 ntBASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 AL805961.1-202ENST00000641562 540 ntBASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms