Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 KRT18P2-201ENST00000447938 1258 ntBASIC14.93□□□□□ -0.02
USB1Q9BQ65 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 AC087163.2-201ENST00000457299 853 ntBASIC14.93□□□□□ -0.02
USB1Q9BQ65 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC14.93□□□□□ -0.02
USB1Q9BQ65 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 AP001094.4-201ENST00000579008 2176 ntBASIC14.92□□□□□ -0.02
USB1Q9BQ65 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 IGLL3P-201ENST00000412472 434 ntBASIC14.92□□□□□ -0.02
USB1Q9BQ65 AL355994.1-201ENST00000424379 260 ntBASIC14.92□□□□□ -0.02
USB1Q9BQ65 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 AC074386.1-202ENST00000463561 864 ntBASIC14.92□□□□□ -0.02
USB1Q9BQ65 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 AC004877.2-201ENST00000623941 599 ntBASIC14.92□□□□□ -0.02
USB1Q9BQ65 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
USB1Q9BQ65 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 AL023806.1-201ENST00000603994 1649 ntBASIC14.92□□□□□ -0.02
USB1Q9BQ65 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
USB1Q9BQ65 BCAR1-209ENST00000546196 1340 ntBASIC14.92□□□□□ -0.02
USB1Q9BQ65 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms