Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMR3AQ99954 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SMR3AQ99954 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMR3AQ99954 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMR3AQ99954 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMR3AQ99954 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.32□□□□□ -0.28
SMR3AQ99954 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMR3AQ99954 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMR3AQ99954 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SMR3AQ99954 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.32□□□□□ -0.28
SMR3AQ99954 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.32□□□□□ -0.28
SMR3AQ99954 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.31□□□□□ -0.28
SMR3AQ99954 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SMR3AQ99954 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.31□□□□□ -0.28
SMR3AQ99954 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.31□□□□□ -0.28
SMR3AQ99954 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SMR3AQ99954 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SMR3AQ99954 MIR326-201ENST00000362220 95 ntBASIC13.31□□□□□ -0.28
SMR3AQ99954 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 CALR4P-201ENST00000431943 946 ntBASIC13.31□□□□□ -0.28
SMR3AQ99954 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 FTH1P14-201ENST00000482930 551 ntBASIC13.31□□□□□ -0.28
SMR3AQ99954 AP001889.1-201ENST00000525414 633 ntBASIC13.31□□□□□ -0.28
SMR3AQ99954 AP001258.2-201ENST00000529891 490 ntBASIC13.31□□□□□ -0.28
SMR3AQ99954 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.31□□□□□ -0.28
SMR3AQ99954 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.31□□□□□ -0.28
SMR3AQ99954 AC024267.1-201ENST00000582320 895 ntBASIC13.31□□□□□ -0.28
SMR3AQ99954 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.31□□□□□ -0.28
SMR3AQ99954 AC025048.3-201ENST00000590609 569 ntBASIC13.31□□□□□ -0.28
SMR3AQ99954 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.31□□□□□ -0.28
SMR3AQ99954 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 AC005702.4-201ENST00000618393 416 ntBASIC13.31□□□□□ -0.28
SMR3AQ99954 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.31□□□□□ -0.28
SMR3AQ99954 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SMR3AQ99954 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.31□□□□□ -0.28
SMR3AQ99954 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
SMR3AQ99954 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.31□□□□□ -0.28
SMR3AQ99954 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMR3AQ99954 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.31□□□□□ -0.28
SMR3AQ99954 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.3□□□□□ -0.28
SMR3AQ99954 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.3□□□□□ -0.28
SMR3AQ99954 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SMR3AQ99954 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SMR3AQ99954 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SMR3AQ99954 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SMR3AQ99954 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SMR3AQ99954 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.3□□□□□ -0.28
SMR3AQ99954 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SMR3AQ99954 SLC25A1P3-201ENST00000395415 828 ntBASIC13.3□□□□□ -0.28
SMR3AQ99954 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SMR3AQ99954 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.3□□□□□ -0.28
SMR3AQ99954 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.3□□□□□ -0.28
SMR3AQ99954 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.3□□□□□ -0.28
SMR3AQ99954 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 AP000812.2-201ENST00000538934 718 ntBASIC13.3□□□□□ -0.28
SMR3AQ99954 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.3□□□□□ -0.28
SMR3AQ99954 AL359711.2-201ENST00000563105 872 ntBASIC13.3□□□□□ -0.28
SMR3AQ99954 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMR3AQ99954 AL022328.3-201ENST00000607943 679 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms