Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.08■□□□□ 0.32
CDCA3Q99618 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.08■□□□□ 0.32
CDCA3Q99618 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 AC245100.3-201ENST00000441281 285 ntBASIC17.08■□□□□ 0.32
CDCA3Q99618 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.08■□□□□ 0.32
CDCA3Q99618 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.08■□□□□ 0.32
CDCA3Q99618 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDCA3Q99618 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.08■□□□□ 0.32
CDCA3Q99618 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.08■□□□□ 0.32
CDCA3Q99618 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.32
CDCA3Q99618 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.08■□□□□ 0.32
CDCA3Q99618 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA3Q99618 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.08■□□□□ 0.32
CDCA3Q99618 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.08■□□□□ 0.32
CDCA3Q99618 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDCA3Q99618 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.07■□□□□ 0.32
CDCA3Q99618 AL133338.1-201ENST00000565695 1517 ntBASIC17.07■□□□□ 0.32
CDCA3Q99618 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDCA3Q99618 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDCA3Q99618 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDCA3Q99618 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDCA3Q99618 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.07■□□□□ 0.32
CDCA3Q99618 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.07■□□□□ 0.32
CDCA3Q99618 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDCA3Q99618 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.07■□□□□ 0.32
CDCA3Q99618 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDCA3Q99618 AC010319.3-201ENST00000597028 470 ntBASIC17.07■□□□□ 0.32
CDCA3Q99618 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDCA3Q99618 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDCA3Q99618 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDCA3Q99618 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.07■□□□□ 0.32
CDCA3Q99618 GPAA1P2-202ENST00000606848 1787 ntBASIC17.07■□□□□ 0.32
CDCA3Q99618 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA3Q99618 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CDCA3Q99618 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.06■□□□□ 0.32
CDCA3Q99618 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.06■□□□□ 0.32
CDCA3Q99618 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDCA3Q99618 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.06■□□□□ 0.32
CDCA3Q99618 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.06■□□□□ 0.32
CDCA3Q99618 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDCA3Q99618 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.06■□□□□ 0.32
CDCA3Q99618 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDCA3Q99618 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.06■□□□□ 0.32
CDCA3Q99618 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.06■□□□□ 0.32
CDCA3Q99618 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
CDCA3Q99618 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CDCA3Q99618 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDCA3Q99618 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.06■□□□□ 0.32
CDCA3Q99618 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.06■□□□□ 0.32
CDCA3Q99618 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDCA3Q99618 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.06■□□□□ 0.32
CDCA3Q99618 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.06■□□□□ 0.32
CDCA3Q99618 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.06■□□□□ 0.32
CDCA3Q99618 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.06■□□□□ 0.32
CDCA3Q99618 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.06■□□□□ 0.32
CDCA3Q99618 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.06■□□□□ 0.32
CDCA3Q99618 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.06■□□□□ 0.32
CDCA3Q99618 AC233724.13-201ENST00000598383 410 ntBASIC17.06■□□□□ 0.32
CDCA3Q99618 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA3Q99618 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms