Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 KLF2P3-201ENST00000451977 1087 ntBASIC13.52□□□□□ -0.25
ZNF48Q96MX3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 SLC25A39P2-201ENST00000537614 270 ntBASIC13.52□□□□□ -0.25
ZNF48Q96MX3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 AC138761.1-201ENST00000584393 385 ntBASIC13.52□□□□□ -0.25
ZNF48Q96MX3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 AJ011932.1-201ENST00000621707 465 ntBASIC13.52□□□□□ -0.25
ZNF48Q96MX3 AC084121.4-201ENST00000641598 221 ntBASIC13.52□□□□□ -0.25
ZNF48Q96MX3 AF228730.8-201ENST00000642140 221 ntBASIC13.52□□□□□ -0.25
ZNF48Q96MX3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
ZNF48Q96MX3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 AC022211.2-201ENST00000585075 2527 ntBASIC13.51□□□□□ -0.25
ZNF48Q96MX3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 PMS2P4-201ENST00000412466 1052 ntBASIC13.51□□□□□ -0.25
ZNF48Q96MX3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 AC125807.1-201ENST00000483097 614 ntBASIC13.51□□□□□ -0.25
ZNF48Q96MX3 RNA5SP421-201ENST00000516864 134 ntBASIC13.51□□□□□ -0.25
ZNF48Q96MX3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 AC091167.2-201ENST00000579581 588 ntBASIC13.51□□□□□ -0.25
ZNF48Q96MX3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZNF48Q96MX3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms