Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC009113.1-201ENST00000570267 2443 ntBASIC17.77■□□□□ 0.43
ALPK3Q96L96 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALPK3Q96L96 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALPK3Q96L96 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALPK3Q96L96 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
ALPK3Q96L96 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
ALPK3Q96L96 AC007613.1-201ENST00000572811 2597 ntBASIC17.77■□□□□ 0.43
ALPK3Q96L96 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 AC016694.1-201ENST00000434179 700 ntBASIC17.76■□□□□ 0.43
ALPK3Q96L96 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 AL589702.1-201ENST00000641229 1509 ntBASIC17.76■□□□□ 0.43
ALPK3Q96L96 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 NUS1P3-201ENST00000423502 862 ntBASIC17.76■□□□□ 0.43
ALPK3Q96L96 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ALPK3Q96L96 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALPK3Q96L96 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ALPK3Q96L96 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 SOCS2P1-201ENST00000417727 557 ntBASIC17.75■□□□□ 0.43
ALPK3Q96L96 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.75■□□□□ 0.43
ALPK3Q96L96 UPF3AP2-201ENST00000457924 1132 ntBASIC17.75■□□□□ 0.43
ALPK3Q96L96 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ALPK3Q96L96 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.75■□□□□ 0.43
ALPK3Q96L96 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.75■□□□□ 0.43
ALPK3Q96L96 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 AC026471.1-201ENST00000564629 3026 ntBASIC17.75■□□□□ 0.43
ALPK3Q96L96 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ALPK3Q96L96 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ALPK3Q96L96 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.75■□□□□ 0.43
ALPK3Q96L96 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.75■□□□□ 0.43
ALPK3Q96L96 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALPK3Q96L96 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 AL139010.1-201ENST00000454878 894 ntBASIC17.74■□□□□ 0.43
ALPK3Q96L96 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 AC013467.2-201ENST00000605472 835 ntBASIC17.74■□□□□ 0.43
ALPK3Q96L96 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 CYP4F24P-201ENST00000586049 1580 ntBASIC17.74■□□□□ 0.43
ALPK3Q96L96 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 BTBD6P1-201ENST00000412176 1267 ntBASIC17.74■□□□□ 0.43
ALPK3Q96L96 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 MTX1P1-201ENST00000440904 838 ntBASIC17.74■□□□□ 0.43
ALPK3Q96L96 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 SCARNA20.5-201ENST00000516991 142 ntBASIC17.74■□□□□ 0.43
ALPK3Q96L96 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ALPK3Q96L96 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALPK3Q96L96 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALPK3Q96L96 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms