Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 MIR346-201ENST00000362234 95 ntBASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 IGHV3-42-201ENST00000520410 361 ntBASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP6V0A1Q93050 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP6V0A1Q93050 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 AL138918.1-201ENST00000568306 659 ntBASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 AL390754.1-201ENST00000619088 582 ntBASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V0A1Q93050 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V0A1Q93050 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.52■□□□□ 0.55
ATP6V0A1Q93050 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V0A1Q93050 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms