Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTCD2Q8WV60 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 AL512652.2-201ENST00000625156 1716 ntBASIC16.85■□□□□ 0.29
PTCD2Q8WV60 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 RPSAP43-201ENST00000402237 625 ntBASIC16.85■□□□□ 0.29
PTCD2Q8WV60 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 GPX1P2-201ENST00000429271 606 ntBASIC16.85■□□□□ 0.29
PTCD2Q8WV60 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 AC112482.1-201ENST00000492080 688 ntBASIC16.85■□□□□ 0.29
PTCD2Q8WV60 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 MTHFR-217ENST00000641820 1569 ntBASIC16.85■□□□□ 0.29
PTCD2Q8WV60 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCD2Q8WV60 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AC004832.2-201ENST00000426397 482 ntBASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 UPF3AP2-201ENST00000457924 1132 ntBASIC16.84■□□□□ 0.29
PTCD2Q8WV60 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 ACTL9-202ENST00000612068 1252 ntBASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AC004877.2-201ENST00000623941 599 ntBASIC16.84■□□□□ 0.29
PTCD2Q8WV60 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.84■□□□□ 0.29
PTCD2Q8WV60 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms