Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 AC023157.3-201ENST00000619086 2088 ntBASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 NUS1P1-201ENST00000446295 882 ntBASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 AC093827.2-201ENST00000512654 315 ntBASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 VENTXP5-201ENST00000523979 775 ntBASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 AL009178.2-201ENST00000597278 2719 ntBASIC15.23■□□□□ 0.03
CNIH3Q8TBE1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 SNX33P1-201ENST00000592116 1762 ntBASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 AP002414.1-201ENST00000391405 1147 ntBASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 AC073592.5-201ENST00000624854 528 ntBASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.22■□□□□ 0.03
CNIH3Q8TBE1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 AL031731.1-201ENST00000642131 2094 ntBASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms