Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC148Q8NFR7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC148Q8NFR7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC148Q8NFR7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.14■□□□□ 0.66
CCDC148Q8NFR7 GGT4P-201ENST00000623672 1708 ntBASIC19.14■□□□□ 0.66
CCDC148Q8NFR7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC148Q8NFR7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 UBALD1-205ENST00000590891 2641 ntBASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 DNAJB3-201ENST00000446806 729 ntBASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 GGT3P-204ENST00000453783 1664 ntBASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 GPAA1P2-202ENST00000606848 1787 ntBASIC19.14■□□□□ 0.65
CCDC148Q8NFR7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 YBX2P1-201ENST00000394192 760 ntBASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 AC092474.2-201ENST00000424288 719 ntBASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 AC020765.3-201ENST00000613051 740 ntBASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 AC091812.2-201ENST00000619081 385 ntBASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC148Q8NFR7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 BX842568.4-201ENST00000421222 227 ntBASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 FAM58CP-201ENST00000435741 640 ntBASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC148Q8NFR7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms