Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 MTHFR-217ENST00000641820 1569 ntBASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 MIR3180-1-201ENST00000580374 94 ntBASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 MIR3180-3-201ENST00000584616 94 ntBASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 AC069148.1-201ENST00000608741 768 ntBASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 AC073592.4-201ENST00000623827 446 ntBASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNAAF1Q8NEP3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 AC148477.5-201ENST00000625164 1645 ntBASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 ABCD1P5-201ENST00000445663 754 ntBASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 NPAP1P7-201ENST00000613027 823 ntBASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 AC006538.1-201ENST00000567905 1585 ntBASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
DNAAF1Q8NEP3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms