Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AC026120.1-201ENST00000611536 926 ntBASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AC055717.3-201ENST00000622967 595 ntBASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
ZIC4Q8N9L1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 AC079328.2-201ENST00000561241 3354 ntBASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 KRT18P13-201ENST00000400056 1290 ntBASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 LINC01225-203ENST00000563550 1244 ntBASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 AC073439.1-201ENST00000624121 1774 ntBASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 AL662844.4-201ENST00000606367 2838 ntBASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC4Q8N9L1 AC005622.1-201ENST00000636801 1703 ntBASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms