Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC155Q8N6L0 AC079328.2-201ENST00000561241 3354 ntBASIC18.83■□□□□ 0.61
CCDC155Q8N6L0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC155Q8N6L0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC155Q8N6L0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CCDC155Q8N6L0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC155Q8N6L0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC155Q8N6L0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC155Q8N6L0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 KRT18P32-201ENST00000424695 1287 ntBASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 AL161645.1-201ENST00000622716 1255 ntBASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 Z92544.3-201ENST00000624747 417 ntBASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC155Q8N6L0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 AKAP8P1-201ENST00000434743 1349 ntBASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 KRT8P48-201ENST00000515599 1220 ntBASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 AC093520.2-201ENST00000561830 333 ntBASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 RARRES2P8-201ENST00000566335 367 ntBASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 AJ011932.1-201ENST00000621707 465 ntBASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC155Q8N6L0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 AC092171.3-201ENST00000610122 2651 ntBASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 TFAMP1-201ENST00000412727 736 ntBASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 AC069335.1-201ENST00000489972 472 ntBASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 AC079140.1-201ENST00000508039 487 ntBASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 AC093214.1-201ENST00000511688 1107 ntBASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 MIR4515-201ENST00000584082 81 ntBASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC155Q8N6L0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms