Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.98■□□□□ 0.31
SIX5Q8N196 FOXO1B-201ENST00000504678 1527 ntBASIC16.98■□□□□ 0.31
SIX5Q8N196 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.98■□□□□ 0.31
SIX5Q8N196 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SIX5Q8N196 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SIX5Q8N196 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SIX5Q8N196 SPDYE19P-201ENST00000338590 713 ntBASIC16.98■□□□□ 0.31
SIX5Q8N196 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SIX5Q8N196 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SIX5Q8N196 AC022210.1-201ENST00000449856 793 ntBASIC16.98■□□□□ 0.31
SIX5Q8N196 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.98■□□□□ 0.31
SIX5Q8N196 PRYP6-201ENST00000514804 343 ntBASIC16.98■□□□□ 0.31
SIX5Q8N196 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.98■□□□□ 0.31
SIX5Q8N196 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.98■□□□□ 0.31
SIX5Q8N196 MPDU1-223ENST00000582151 728 ntBASIC16.98■□□□□ 0.31
SIX5Q8N196 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.98■□□□□ 0.31
SIX5Q8N196 CHCHD2P3-201ENST00000603038 451 ntBASIC16.98■□□□□ 0.31
SIX5Q8N196 LINC00896-202ENST00000609602 2128 ntBASIC16.98■□□□□ 0.31
SIX5Q8N196 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
SIX5Q8N196 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SIX5Q8N196 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.97■□□□□ 0.31
SIX5Q8N196 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SIX5Q8N196 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.97■□□□□ 0.31
SIX5Q8N196 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.97■□□□□ 0.31
SIX5Q8N196 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.97■□□□□ 0.31
SIX5Q8N196 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.97■□□□□ 0.31
SIX5Q8N196 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 DOC2GP-202ENST00000514950 1163 ntBASIC16.97■□□□□ 0.31
SIX5Q8N196 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SIX5Q8N196 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SIX5Q8N196 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.97■□□□□ 0.31
SIX5Q8N196 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.97■□□□□ 0.31
SIX5Q8N196 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.97■□□□□ 0.31
SIX5Q8N196 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.97■□□□□ 0.31
SIX5Q8N196 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SIX5Q8N196 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SIX5Q8N196 AC084346.2-201ENST00000607097 949 ntBASIC16.97■□□□□ 0.31
SIX5Q8N196 AC007431.3-201ENST00000623221 587 ntBASIC16.97■□□□□ 0.31
SIX5Q8N196 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.97■□□□□ 0.31
SIX5Q8N196 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.97■□□□□ 0.31
SIX5Q8N196 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SIX5Q8N196 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX5Q8N196 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SIX5Q8N196 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SIX5Q8N196 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.96■□□□□ 0.31
SIX5Q8N196 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SIX5Q8N196 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.96■□□□□ 0.31
SIX5Q8N196 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SIX5Q8N196 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.96■□□□□ 0.31
SIX5Q8N196 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.96■□□□□ 0.31
SIX5Q8N196 AC093004.1-201ENST00000508850 424 ntBASIC16.96■□□□□ 0.31
SIX5Q8N196 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.96■□□□□ 0.31
SIX5Q8N196 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.96■□□□□ 0.31
SIX5Q8N196 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.96■□□□□ 0.31
SIX5Q8N196 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 BTBD7P1-201ENST00000447253 1453 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms