Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 CU634019.7-201ENST00000624153 1185 ntBASIC19.88■□□□□ 0.77
SLX4Q8IY92 FP236241.2-201ENST00000624906 1185 ntBASIC19.88■□□□□ 0.77
SLX4Q8IY92 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLX4Q8IY92 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLX4Q8IY92 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLX4Q8IY92 BRWD1P1-201ENST00000401091 371 ntBASIC19.88■□□□□ 0.77
SLX4Q8IY92 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.88■□□□□ 0.77
SLX4Q8IY92 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 KRT8P22-201ENST00000562317 1415 ntBASIC19.87■□□□□ 0.77
SLX4Q8IY92 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 RPL7P3-201ENST00000441388 714 ntBASIC19.87■□□□□ 0.77
SLX4Q8IY92 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 AC036164.1-201ENST00000570544 333 ntBASIC19.87■□□□□ 0.77
SLX4Q8IY92 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.87■□□□□ 0.77
SLX4Q8IY92 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLX4Q8IY92 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 AC005229.1-201ENST00000392885 409 ntBASIC19.86■□□□□ 0.77
SLX4Q8IY92 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 FTH1P14-201ENST00000482930 551 ntBASIC19.86■□□□□ 0.77
SLX4Q8IY92 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 MIR4321-201ENST00000592276 80 ntBASIC19.86■□□□□ 0.77
SLX4Q8IY92 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLX4Q8IY92 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 EEF1DP4-201ENST00000446006 880 ntBASIC19.86■□□□□ 0.77
SLX4Q8IY92 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.86■□□□□ 0.77
SLX4Q8IY92 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLX4Q8IY92 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLX4Q8IY92 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLX4Q8IY92 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLX4Q8IY92 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.85■□□□□ 0.77
SLX4Q8IY92 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLX4Q8IY92 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 FAM21FP-201ENST00000426241 1131 ntBASIC19.85■□□□□ 0.77
SLX4Q8IY92 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.85■□□□□ 0.77
SLX4Q8IY92 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms