Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 AC025580.3-201ENST00000617932 1424 ntBASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 AC027601.4-201ENST00000611259 610 ntBASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 AC005052.1-201ENST00000625181 2492 ntBASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC65Q8IXS2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 LINC01144-201ENST00000626198 1710 ntBASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 AL591424.1-201ENST00000442569 1213 ntBASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 RNA5SP416-201ENST00000516838 111 ntBASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 AL662844.4-201ENST00000606367 2838 ntBASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC65Q8IXS2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 FER1L4-210ENST00000615531 5998 ntBASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC65Q8IXS2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms