Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 RNU1-129P-201ENST00000384064 167 ntBASIC18.72■□□□□ 0.59
SHC4Q6S5L8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 AC009947.1-201ENST00000444350 727 ntBASIC18.72■□□□□ 0.59
SHC4Q6S5L8 FAAHP1-202ENST00000446499 1238 ntBASIC18.72■□□□□ 0.59
SHC4Q6S5L8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 UNC93B6-202ENST00000528242 690 ntBASIC18.72■□□□□ 0.59
SHC4Q6S5L8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 U1.21-201ENST00000580816 167 ntBASIC18.72■□□□□ 0.59
SHC4Q6S5L8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 MIR4751-201ENST00000578027 74 ntBASIC18.71■□□□□ 0.59
SHC4Q6S5L8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 AC105917.1-201ENST00000506637 2539 ntBASIC18.71■□□□□ 0.59
SHC4Q6S5L8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC4Q6S5L8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 VN2R19P-201ENST00000442399 1052 ntBASIC18.7■□□□□ 0.58
SHC4Q6S5L8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC4Q6S5L8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms