Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AP001160.2-201ENST00000596071 487 ntBASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 AC099522.2-201ENST00000607001 744 ntBASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
RFWD3Q6PCD5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 AC002056.1-201ENST00000395613 760 ntBASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 AP006288.1-201ENST00000446065 395 ntBASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 CYP2A7P1-201ENST00000595391 815 ntBASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 AC132872.4-202ENST00000622924 2756 ntBASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.33■□□□□ 0.36
RFWD3Q6PCD5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 HYMAI-201ENST00000635591 3347 ntBASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 AL603756.1-201ENST00000606511 2163 ntBASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFWD3Q6PCD5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms