Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 HLA-J-202ENST00000469281 1241 ntBASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 AC020765.3-201ENST00000613051 740 ntBASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 SPTSSB-204ENST00000617024 1292 ntBASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 MIR6080-201ENST00000617359 66 ntBASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 AC106886.4-201ENST00000623557 2502 ntBASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.44■□□□□ 0.54
SWSAP1Q6NVH7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 KLF2P3-201ENST00000451977 1087 ntBASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 RARRES2P9-201ENST00000565168 469 ntBASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 MIR4453-201ENST00000584019 89 ntBASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SWSAP1Q6NVH7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 AC005498.2-205ENST00000593218 784 ntBASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms