Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST2H2AA3Q6FI13 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.08■□□□□ 0.17
HIST2H2AA3Q6FI13 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST2H2AA3Q6FI13 SNX33P1-201ENST00000592116 1762 ntBASIC16.08■□□□□ 0.17
HIST2H2AA3Q6FI13 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.08■□□□□ 0.17
HIST2H2AA3Q6FI13 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST2H2AA3Q6FI13 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 AC079776.4-201ENST00000511039 504 ntBASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 Z83851.2-201ENST00000609564 659 ntBASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 AL645728.2-201ENST00000641974 660 ntBASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 AC079328.2-201ENST00000561241 3354 ntBASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST2H2AA3Q6FI13 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 AL671710.1-201ENST00000610245 2349 ntBASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 AL512652.2-201ENST00000625156 1716 ntBASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2AA3Q6FI13 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 AL031432.2-201ENST00000566714 459 ntBASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 AL928711.1-201ENST00000570165 459 ntBASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 ACTL9-202ENST00000612068 1252 ntBASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 AC007064.4-201ENST00000637740 555 ntBASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms