Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 EML3-217ENST00000531557 2509 ntTSL 5 BASIC24.66■■□□□ 1.54
CDC42BPAQ5VT25 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 AC005915.1-201ENST00000624912 2018 ntBASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 NSL1-201ENST00000366976 722 ntTSL 2 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 MFF-223ENST00000524634 647 ntTSL 2 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 AL645608.8-201ENST00000606034 2086 ntBASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC24.65■■□□□ 1.54
CDC42BPAQ5VT25 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 AL442647.2-201ENST00000429864 857 ntBASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 AL162726.2-201ENST00000438986 1017 ntBASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 AC036164.1-201ENST00000570544 333 ntBASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 PAM16-215ENST00000577031 548 ntTSL 4 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 MIR4525-201ENST00000580000 75 ntBASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 AC078925.2-201ENST00000624013 1973 ntBASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC24.64■■□□□ 1.54
CDC42BPAQ5VT25 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC24.64■■□□□ 1.53
CDC42BPAQ5VT25 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC24.63■■□□□ 1.53
CDC42BPAQ5VT25 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 FO393414.2-201ENST00000405153 598 ntBASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 AC092552.1-201ENST00000547243 906 ntBASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms