Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 HLA-A-202ENST00000376806 1854 ntBASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ATPAF1Q5TC12 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 SART3-203ENST00000546611 1184 ntBASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATPAF1Q5TC12 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 AL589182.2-201ENST00000619332 1049 ntBASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 AC023824.1-201ENST00000562945 2975 ntBASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ATPAF1Q5TC12 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 AC104640.1-201ENST00000562617 2109 ntBASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ATPAF1Q5TC12 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms