Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALFQ53S48 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALFQ53S48 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.07■□□□□ 0.32
ALFQ53S48 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.07■□□□□ 0.32
ALFQ53S48 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.07■□□□□ 0.32
ALFQ53S48 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.07■□□□□ 0.32
ALFQ53S48 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.07■□□□□ 0.32
ALFQ53S48 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALFQ53S48 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.07■□□□□ 0.32
ALFQ53S48 AC022145.2-201ENST00000598203 171 ntBASIC17.07■□□□□ 0.32
ALFQ53S48 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.07■□□□□ 0.32
ALFQ53S48 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.07■□□□□ 0.32
ALFQ53S48 AL596442.2-201ENST00000610240 980 ntBASIC17.07■□□□□ 0.32
ALFQ53S48 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.07■□□□□ 0.32
ALFQ53S48 AL513210.1-201ENST00000629608 234 ntBASIC17.07■□□□□ 0.32
ALFQ53S48 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ALFQ53S48 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALFQ53S48 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.07■□□□□ 0.32
ALFQ53S48 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.07■□□□□ 0.32
ALFQ53S48 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ALFQ53S48 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ALFQ53S48 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.07■□□□□ 0.32
ALFQ53S48 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALFQ53S48 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALFQ53S48 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALFQ53S48 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.07■□□□□ 0.32
ALFQ53S48 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.07■□□□□ 0.32
ALFQ53S48 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ALFQ53S48 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.06■□□□□ 0.32
ALFQ53S48 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ALFQ53S48 AKAP8P1-201ENST00000434743 1349 ntBASIC17.06■□□□□ 0.32
ALFQ53S48 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ALFQ53S48 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ALFQ53S48 AC004461.1-201ENST00000412461 403 ntBASIC17.06■□□□□ 0.32
ALFQ53S48 SPDYE11-202ENST00000450699 704 ntBASIC17.06■□□□□ 0.32
ALFQ53S48 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ALFQ53S48 FAM86C2P-203ENST00000528684 1004 ntBASIC17.06■□□□□ 0.32
ALFQ53S48 SPDYE9P-201ENST00000570642 692 ntBASIC17.06■□□□□ 0.32
ALFQ53S48 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.06■□□□□ 0.32
ALFQ53S48 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.06■□□□□ 0.32
ALFQ53S48 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.06■□□□□ 0.32
ALFQ53S48 SPDYE10P-202ENST00000612005 668 ntBASIC17.06■□□□□ 0.32
ALFQ53S48 SPDYE8P-202ENST00000612377 668 ntBASIC17.06■□□□□ 0.32
ALFQ53S48 GPAA1P2-202ENST00000606848 1787 ntBASIC17.06■□□□□ 0.32
ALFQ53S48 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.06■□□□□ 0.32
ALFQ53S48 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.06■□□□□ 0.32
ALFQ53S48 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
ALFQ53S48 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.06■□□□□ 0.32
ALFQ53S48 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.06■□□□□ 0.32
ALFQ53S48 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.06■□□□□ 0.32
ALFQ53S48 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ALFQ53S48 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ALFQ53S48 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.06■□□□□ 0.32
ALFQ53S48 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALFQ53S48 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
ALFQ53S48 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.05■□□□□ 0.32
ALFQ53S48 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ALFQ53S48 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.05■□□□□ 0.32
ALFQ53S48 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.05■□□□□ 0.32
ALFQ53S48 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.05■□□□□ 0.32
ALFQ53S48 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.05■□□□□ 0.32
ALFQ53S48 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.05■□□□□ 0.32
ALFQ53S48 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.05■□□□□ 0.32
ALFQ53S48 AC079140.1-201ENST00000508039 487 ntBASIC17.05■□□□□ 0.32
ALFQ53S48 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.05■□□□□ 0.32
ALFQ53S48 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.05■□□□□ 0.32
ALFQ53S48 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.05■□□□□ 0.32
ALFQ53S48 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.05■□□□□ 0.32
ALFQ53S48 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.05■□□□□ 0.32
ALFQ53S48 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.05■□□□□ 0.32
ALFQ53S48 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.05■□□□□ 0.32
ALFQ53S48 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ALFQ53S48 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALFQ53S48 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms