Protein–RNA interactions for Protein: Q15223

NECTIN1, Nectin-1, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1Q15223 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.65■□□□□ 0.74
NECTIN1Q15223 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN1Q15223 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.65■□□□□ 0.74
NECTIN1Q15223 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.65■□□□□ 0.74
NECTIN1Q15223 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN1Q15223 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.65■□□□□ 0.74
NECTIN1Q15223 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN1Q15223 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN1Q15223 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN1Q15223 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.65■□□□□ 0.74
NECTIN1Q15223 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NECTIN1Q15223 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NECTIN1Q15223 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
NECTIN1Q15223 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
NECTIN1Q15223 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
NECTIN1Q15223 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 AC093724.1-201ENST00000448659 1027 ntBASIC19.64■□□□□ 0.73
NECTIN1Q15223 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 AC068137.2-201ENST00000605408 478 ntBASIC19.64■□□□□ 0.73
NECTIN1Q15223 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 AC016027.1-202ENST00000607927 1699 ntBASIC19.64■□□□□ 0.73
NECTIN1Q15223 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 AL603832.2-201ENST00000566195 2125 ntBASIC19.64■□□□□ 0.73
NECTIN1Q15223 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.64■□□□□ 0.73
NECTIN1Q15223 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN1Q15223 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 AL365203.3-201ENST00000609742 2057 ntBASIC19.63■□□□□ 0.73
NECTIN1Q15223 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 MIR574-201ENST00000385209 96 ntBASIC19.63■□□□□ 0.73
NECTIN1Q15223 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 AC099522.2-201ENST00000607001 744 ntBASIC19.63■□□□□ 0.73
NECTIN1Q15223 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN1Q15223 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
NECTIN1Q15223 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 AC024909.3-201ENST00000611513 2257 ntBASIC19.62■□□□□ 0.73
NECTIN1Q15223 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 PGAM5P1-201ENST00000518923 814 ntBASIC19.62■□□□□ 0.73
NECTIN1Q15223 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 AL671883.3-201ENST00000603274 991 ntBASIC19.62■□□□□ 0.73
NECTIN1Q15223 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN1Q15223 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.62■□□□□ 0.73
NECTIN1Q15223 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms