Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 PMS2P4-201ENST00000412466 1052 ntBASIC14.53□□□□□ -0.08
HIST1H3AP68431 FDX1P1-201ENST00000449115 551 ntBASIC14.53□□□□□ -0.08
HIST1H3AP68431 AL513480.1-201ENST00000451731 511 ntBASIC14.53□□□□□ -0.08
HIST1H3AP68431 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 AC021097.1-201ENST00000607902 574 ntBASIC14.53□□□□□ -0.08
HIST1H3AP68431 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.53□□□□□ -0.08
HIST1H3AP68431 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 AC008894.3-201ENST00000624324 3103 ntBASIC14.52□□□□□ -0.08
HIST1H3AP68431 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST1H3AP68431 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST1H3AP68431 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H3AP68431 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST1H3AP68431 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST1H3AP68431 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HIST1H3AP68431 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 AC034105.1-201ENST00000563488 319 ntBASIC14.52□□□□□ -0.09
HIST1H3AP68431 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 AC010507.1-201ENST00000633895 436 ntBASIC14.52□□□□□ -0.09
HIST1H3AP68431 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H3AP68431 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST1H3AP68431 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H3AP68431 AL513523.2-202ENST00000427283 2040 ntBASIC14.51□□□□□ -0.09
HIST1H3AP68431 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H3AP68431 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H3AP68431 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H3AP68431 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H3AP68431 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.51□□□□□ -0.09
HIST1H3AP68431 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms