Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 AL365203.3-201ENST00000609742 2057 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 PMPCAP1-201ENST00000508114 1576 ntBASIC14.64□□□□□ -0.07
SEC61A1P61619 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61A1P61619 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.64□□□□□ -0.07
SEC61A1P61619 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.63□□□□□ -0.07
SEC61A1P61619 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SEC61A1P61619 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SEC61A1P61619 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
SEC61A1P61619 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SEC61A1P61619 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SEC61A1P61619 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SEC61A1P61619 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 AL022342.1-201ENST00000400363 863 ntBASIC14.63□□□□□ -0.07
SEC61A1P61619 RPS2P1-201ENST00000434010 821 ntBASIC14.63□□□□□ -0.07
SEC61A1P61619 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.63□□□□□ -0.07
SEC61A1P61619 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.63□□□□□ -0.07
SEC61A1P61619 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SEC61A1P61619 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.63□□□□□ -0.07
SEC61A1P61619 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.63□□□□□ -0.07
SEC61A1P61619 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.63□□□□□ -0.07
SEC61A1P61619 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.63□□□□□ -0.07
SEC61A1P61619 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SEC61A1P61619 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SEC61A1P61619 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SEC61A1P61619 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.63□□□□□ -0.07
SEC61A1P61619 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SEC61A1P61619 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SEC61A1P61619 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SEC61A1P61619 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61A1P61619 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
SEC61A1P61619 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.63□□□□□ -0.07
SEC61A1P61619 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SEC61A1P61619 AC243591.1-201ENST00000452967 1364 ntBASIC14.62□□□□□ -0.07
SEC61A1P61619 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SEC61A1P61619 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.62□□□□□ -0.07
SEC61A1P61619 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SEC61A1P61619 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.62□□□□□ -0.07
SEC61A1P61619 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.62□□□□□ -0.07
SEC61A1P61619 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.62□□□□□ -0.07
SEC61A1P61619 AC025062.2-201ENST00000605477 670 ntBASIC14.62□□□□□ -0.07
SEC61A1P61619 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 AL139327.4-201ENST00000612362 153 ntBASIC14.62□□□□□ -0.07
SEC61A1P61619 AL049757.1-201ENST00000616842 1596 ntBASIC14.62□□□□□ -0.07
SEC61A1P61619 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.62□□□□□ -0.07
SEC61A1P61619 AL139288.1-201ENST00000623748 933 ntBASIC14.62□□□□□ -0.07
SEC61A1P61619 AC073592.5-201ENST00000624854 528 ntBASIC14.62□□□□□ -0.07
SEC61A1P61619 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SEC61A1P61619 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms