Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.32□□□□□ -0.12
AP3S2P59780 AL009178.2-201ENST00000597278 2719 ntBASIC14.32□□□□□ -0.12
AP3S2P59780 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.32□□□□□ -0.12
AP3S2P59780 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.32□□□□□ -0.12
AP3S2P59780 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
AP3S2P59780 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.32□□□□□ -0.12
AP3S2P59780 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
AP3S2P59780 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.32□□□□□ -0.12
AP3S2P59780 FITM1-202ENST00000559294 800 ntBASIC14.32□□□□□ -0.12
AP3S2P59780 AC005332.3-201ENST00000589904 676 ntBASIC14.32□□□□□ -0.12
AP3S2P59780 AC013467.2-201ENST00000605472 835 ntBASIC14.32□□□□□ -0.12
AP3S2P59780 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.32□□□□□ -0.12
AP3S2P59780 AC092666.2-201ENST00000613287 246 ntBASIC14.32□□□□□ -0.12
AP3S2P59780 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AP3S2P59780 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.32□□□□□ -0.12
AP3S2P59780 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 LINC02447-202ENST00000501888 2146 ntBASIC14.32□□□□□ -0.12
AP3S2P59780 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
AP3S2P59780 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
AP3S2P59780 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 PPT1-215ENST00000641471 2368 ntBASIC14.31□□□□□ -0.12
AP3S2P59780 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
AP3S2P59780 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 IGHGP-201ENST00000390555 1178 ntBASIC14.31□□□□□ -0.12
AP3S2P59780 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.31□□□□□ -0.12
AP3S2P59780 EGLN1P1-201ENST00000531623 762 ntBASIC14.31□□□□□ -0.12
AP3S2P59780 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
AP3S2P59780 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.31□□□□□ -0.12
AP3S2P59780 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.31□□□□□ -0.12
AP3S2P59780 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 AC113410.3-201ENST00000623366 203 ntBASIC14.31□□□□□ -0.12
AP3S2P59780 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 CDC14C-201ENST00000428251 1719 ntBASIC14.31□□□□□ -0.12
AP3S2P59780 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms