Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CMC4P56277 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.36□□□□□ -0.43
CMC4P56277 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.36□□□□□ -0.43
CMC4P56277 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.36□□□□□ -0.43
CMC4P56277 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
CMC4P56277 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.36□□□□□ -0.43
CMC4P56277 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.36□□□□□ -0.43
CMC4P56277 TFAMP1-201ENST00000412727 736 ntBASIC12.36□□□□□ -0.43
CMC4P56277 AC211486.1-202ENST00000416371 468 ntBASIC12.36□□□□□ -0.43
CMC4P56277 GPX1P2-201ENST00000429271 606 ntBASIC12.36□□□□□ -0.43
CMC4P56277 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.36□□□□□ -0.43
CMC4P56277 AC112482.1-201ENST00000492080 688 ntBASIC12.36□□□□□ -0.43
CMC4P56277 AC211476.1-201ENST00000503899 468 ntBASIC12.36□□□□□ -0.43
CMC4P56277 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.36□□□□□ -0.43
CMC4P56277 IGHV3-62-201ENST00000520057 340 ntBASIC12.36□□□□□ -0.43
CMC4P56277 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CMC4P56277 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.36□□□□□ -0.43
CMC4P56277 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.36□□□□□ -0.43
CMC4P56277 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.36□□□□□ -0.43
CMC4P56277 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.36□□□□□ -0.43
CMC4P56277 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CMC4P56277 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CMC4P56277 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CMC4P56277 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.36□□□□□ -0.43
CMC4P56277 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CMC4P56277 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
CMC4P56277 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.35□□□□□ -0.43
CMC4P56277 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 RPSAP43-201ENST00000402237 625 ntBASIC12.35□□□□□ -0.43
CMC4P56277 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 MIR1233-2-201ENST00000408138 82 ntBASIC12.35□□□□□ -0.43
CMC4P56277 MIR1233-1-201ENST00000408722 82 ntBASIC12.35□□□□□ -0.43
CMC4P56277 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.35□□□□□ -0.43
CMC4P56277 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
CMC4P56277 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 YBX1P5-201ENST00000509441 847 ntBASIC12.35□□□□□ -0.43
CMC4P56277 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.35□□□□□ -0.43
CMC4P56277 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CMC4P56277 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CMC4P56277 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 AC005915.1-201ENST00000624912 2018 ntBASIC12.35□□□□□ -0.43
CMC4P56277 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms