Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH12P55289 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH12P55289 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH12P55289 NKAPP1-205ENST00000585790 367 ntBASIC15.55■□□□□ 0.08
CDH12P55289 AC064862.7-201ENST00000604520 867 ntBASIC15.55■□□□□ 0.08
CDH12P55289 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH12P55289 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDH12P55289 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH12P55289 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH12P55289 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH12P55289 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDH12P55289 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH12P55289 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH12P55289 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDH12P55289 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CDH12P55289 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH12P55289 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH12P55289 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 AC006277.1-201ENST00000624348 1610 ntBASIC15.54■□□□□ 0.08
CDH12P55289 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH12P55289 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH12P55289 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH12P55289 FLJ16779-201ENST00000612722 7638 ntBASIC15.54■□□□□ 0.08
CDH12P55289 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH12P55289 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH12P55289 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH12P55289 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH12P55289 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.54■□□□□ 0.08
CDH12P55289 MIR3652-201ENST00000579335 131 ntBASIC15.54■□□□□ 0.08
CDH12P55289 AL353135.1-201ENST00000606729 504 ntBASIC15.54■□□□□ 0.08
CDH12P55289 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH12P55289 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH12P55289 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDH12P55289 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH12P55289 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDH12P55289 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH12P55289 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH12P55289 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH12P55289 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH12P55289 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDH12P55289 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH12P55289 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH12P55289 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDH12P55289 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
CDH12P55289 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH12P55289 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH12P55289 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH12P55289 RBM17P3-201ENST00000417687 1192 ntBASIC15.53■□□□□ 0.08
CDH12P55289 HCG4P8-203ENST00000443049 980 ntBASIC15.53■□□□□ 0.08
CDH12P55289 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CDH12P55289 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH12P55289 AC013467.2-201ENST00000605472 835 ntBASIC15.53■□□□□ 0.08
CDH12P55289 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH12P55289 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH12P55289 AL022326.1-202ENST00000641533 845 ntBASIC15.53■□□□□ 0.08
CDH12P55289 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH12P55289 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH12P55289 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH12P55289 AL596087.1-201ENST00000400979 1969 ntBASIC15.53■□□□□ 0.08
CDH12P55289 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDH12P55289 AL356309.3-201ENST00000624132 1934 ntBASIC15.53■□□□□ 0.08
CDH12P55289 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH12P55289 NORAD-201ENST00000565493 5339 ntBASIC15.53■□□□□ 0.08
CDH12P55289 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH12P55289 NCF1C-201ENST00000438382 1427 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms