Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AIF1P55008 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
AIF1P55008 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AIF1P55008 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AIF1P55008 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.08■□□□□ 0.33
AIF1P55008 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
AIF1P55008 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.08■□□□□ 0.33
AIF1P55008 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
AIF1P55008 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
AIF1P55008 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
AIF1P55008 YBX2P1-201ENST00000394192 760 ntBASIC17.08■□□□□ 0.32
AIF1P55008 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.08■□□□□ 0.32
AIF1P55008 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.08■□□□□ 0.32
AIF1P55008 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.08■□□□□ 0.32
AIF1P55008 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.08■□□□□ 0.32
AIF1P55008 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.08■□□□□ 0.32
AIF1P55008 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.08■□□□□ 0.32
AIF1P55008 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.08■□□□□ 0.32
AIF1P55008 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
AIF1P55008 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.08■□□□□ 0.32
AIF1P55008 AC092902.6-201ENST00000641783 218 ntBASIC17.08■□□□□ 0.32
AIF1P55008 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.08■□□□□ 0.32
AIF1P55008 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.08■□□□□ 0.32
AIF1P55008 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
AIF1P55008 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AIF1P55008 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
AIF1P55008 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 AC005622.1-201ENST00000636801 1703 ntBASIC17.07■□□□□ 0.32
AIF1P55008 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AIF1P55008 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
AIF1P55008 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.07■□□□□ 0.32
AIF1P55008 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.07■□□□□ 0.32
AIF1P55008 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AIF1P55008 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.07■□□□□ 0.32
AIF1P55008 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
AIF1P55008 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
AIF1P55008 AL592424.1-201ENST00000563624 1536 ntBASIC17.06■□□□□ 0.32
AIF1P55008 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
AIF1P55008 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.06■□□□□ 0.32
AIF1P55008 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.06■□□□□ 0.32
AIF1P55008 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.06■□□□□ 0.32
AIF1P55008 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.06■□□□□ 0.32
AIF1P55008 AL671277.1-201ENST00000429656 993 ntBASIC17.06■□□□□ 0.32
AIF1P55008 ADH5P3-201ENST00000433842 1137 ntBASIC17.06■□□□□ 0.32
AIF1P55008 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.06■□□□□ 0.32
AIF1P55008 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.06■□□□□ 0.32
AIF1P55008 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.06■□□□□ 0.32
AIF1P55008 AC073439.1-201ENST00000624121 1774 ntBASIC17.06■□□□□ 0.32
AIF1P55008 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.06■□□□□ 0.32
AIF1P55008 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.06■□□□□ 0.32
AIF1P55008 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
AIF1P55008 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.06■□□□□ 0.32
AIF1P55008 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AIF1P55008 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
AIF1P55008 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms