Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TSPY16P-201ENST00000449843 468 ntBASIC16.13■□□□□ 0.17
PDX1P52945 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.13■□□□□ 0.17
PDX1P52945 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.13■□□□□ 0.17
PDX1P52945 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.13■□□□□ 0.17
PDX1P52945 AL031055.1-201ENST00000606362 631 ntBASIC16.13■□□□□ 0.17
PDX1P52945 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.13■□□□□ 0.17
PDX1P52945 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.13■□□□□ 0.17
PDX1P52945 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PDX1P52945 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.13■□□□□ 0.17
PDX1P52945 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.13■□□□□ 0.17
PDX1P52945 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.13■□□□□ 0.17
PDX1P52945 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.13■□□□□ 0.17
PDX1P52945 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDX1P52945 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
PDX1P52945 EGFEM1P-202ENST00000431685 1563 ntBASIC16.13■□□□□ 0.17
PDX1P52945 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PDX1P52945 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PDX1P52945 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.12■□□□□ 0.17
PDX1P52945 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PDX1P52945 SPDYE7P-202ENST00000420373 878 ntBASIC16.12■□□□□ 0.17
PDX1P52945 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.12■□□□□ 0.17
PDX1P52945 TERF1P3-201ENST00000505638 1227 ntBASIC16.12■□□□□ 0.17
PDX1P52945 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.12■□□□□ 0.17
PDX1P52945 AP000842.3-202ENST00000569238 1080 ntBASIC16.12■□□□□ 0.17
PDX1P52945 MIR3909-201ENST00000579518 119 ntBASIC16.12■□□□□ 0.17
PDX1P52945 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.12■□□□□ 0.17
PDX1P52945 AL158211.3-201ENST00000607385 239 ntBASIC16.12■□□□□ 0.17
PDX1P52945 MIR6080-201ENST00000617359 66 ntBASIC16.12■□□□□ 0.17
PDX1P52945 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.12■□□□□ 0.17
PDX1P52945 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDX1P52945 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PDX1P52945 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PDX1P52945 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PDX1P52945 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PDX1P52945 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.11■□□□□ 0.17
PDX1P52945 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
PDX1P52945 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.11■□□□□ 0.17
PDX1P52945 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PDX1P52945 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.11■□□□□ 0.17
PDX1P52945 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.11■□□□□ 0.17
PDX1P52945 ALG1L8P-201ENST00000533887 760 ntBASIC16.11■□□□□ 0.17
PDX1P52945 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.11■□□□□ 0.17
PDX1P52945 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.11■□□□□ 0.17
PDX1P52945 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.11■□□□□ 0.17
PDX1P52945 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.11■□□□□ 0.17
PDX1P52945 AC091167.2-201ENST00000579581 588 ntBASIC16.11■□□□□ 0.17
PDX1P52945 AC008267.7-201ENST00000624570 1194 ntBASIC16.11■□□□□ 0.17
PDX1P52945 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PDX1P52945 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.11■□□□□ 0.17
PDX1P52945 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PDX1P52945 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDX1P52945 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms