Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.31■□□□□ 0.36
MMP13P45452 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.31■□□□□ 0.36
MMP13P45452 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.31■□□□□ 0.36
MMP13P45452 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.31■□□□□ 0.36
MMP13P45452 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.31■□□□□ 0.36
MMP13P45452 AC108073.2-201ENST00000464002 357 ntBASIC17.31■□□□□ 0.36
MMP13P45452 IGHV3-22-201ENST00000520721 359 ntBASIC17.31■□□□□ 0.36
MMP13P45452 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
MMP13P45452 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.31■□□□□ 0.36
MMP13P45452 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 AC023824.1-201ENST00000562945 2975 ntBASIC17.31■□□□□ 0.36
MMP13P45452 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.31■□□□□ 0.36
MMP13P45452 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.31■□□□□ 0.36
MMP13P45452 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP13P45452 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 AC002310.6-201ENST00000624451 1377 ntBASIC17.3■□□□□ 0.36
MMP13P45452 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP13P45452 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP13P45452 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
MMP13P45452 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MMP13P45452 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MMP13P45452 AC108751.1-201ENST00000490852 363 ntBASIC17.3■□□□□ 0.36
MMP13P45452 SLC25A6P2-201ENST00000497974 877 ntBASIC17.3■□□□□ 0.36
MMP13P45452 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP13P45452 UNC93B6-202ENST00000528242 690 ntBASIC17.3■□□□□ 0.36
MMP13P45452 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP13P45452 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.3■□□□□ 0.36
MMP13P45452 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.3■□□□□ 0.36
MMP13P45452 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP13P45452 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP13P45452 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP13P45452 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP13P45452 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP13P45452 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP13P45452 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP13P45452 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MMP13P45452 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP13P45452 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP13P45452 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MMP13P45452 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 MRPL20P1-201ENST00000400819 433 ntBASIC17.29■□□□□ 0.36
MMP13P45452 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.29■□□□□ 0.36
MMP13P45452 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP13P45452 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP13P45452 RNA5SP415-201ENST00000517246 115 ntBASIC17.29■□□□□ 0.36
MMP13P45452 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP13P45452 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP13P45452 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
MMP13P45452 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 AC004790.2-201ENST00000623588 572 ntBASIC17.29■□□□□ 0.36
MMP13P45452 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP13P45452 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP13P45452 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MMP13P45452 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms