Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A3P43003 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC1A3P43003 AL353732.1-201ENST00000569618 1459 ntBASIC15.33■□□□□ 0.04
SLC1A3P43003 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 AC006538.1-201ENST00000567905 1585 ntBASIC15.32■□□□□ 0.04
SLC1A3P43003 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A3P43003 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A3P43003 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SLC1A3P43003 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A3P43003 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A3P43003 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A3P43003 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 MRPL3P1-201ENST00000400109 1033 ntBASIC15.32■□□□□ 0.04
SLC1A3P43003 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC1A3P43003 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A3P43003 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.32■□□□□ 0.04
SLC1A3P43003 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A3P43003 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A3P43003 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A3P43003 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A3P43003 AP001005.1-201ENST00000571755 1248 ntBASIC15.32■□□□□ 0.04
SLC1A3P43003 AC005412.3-201ENST00000580309 715 ntBASIC15.32■□□□□ 0.04
SLC1A3P43003 MIR4492-201ENST00000581627 80 ntBASIC15.32■□□□□ 0.04
SLC1A3P43003 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A3P43003 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
SLC1A3P43003 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A3P43003 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.32■□□□□ 0.04
SLC1A3P43003 MIR7706-201ENST00000613747 67 ntBASIC15.32■□□□□ 0.04
SLC1A3P43003 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A3P43003 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A3P43003 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A3P43003 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC1A3P43003 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A3P43003 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A3P43003 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A3P43003 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A3P43003 AC131009.4-201ENST00000624048 1740 ntBASIC15.31■□□□□ 0.04
SLC1A3P43003 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC1A3P43003 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
SLC1A3P43003 AC108073.2-201ENST00000464002 357 ntBASIC15.31■□□□□ 0.04
SLC1A3P43003 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 RNA5SP419-201ENST00000515908 135 ntBASIC15.31■□□□□ 0.04
SLC1A3P43003 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC1A3P43003 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC1A3P43003 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC1A3P43003 AL049840.3-201ENST00000602669 611 ntBASIC15.31■□□□□ 0.04
SLC1A3P43003 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC1A3P43003 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A3P43003 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC1A3P43003 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC1A3P43003 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A3P43003 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A3P43003 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A3P43003 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A3P43003 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A3P43003 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms