Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
GRIK1P39086 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GRIK1P39086 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GRIK1P39086 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
GRIK1P39086 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.48■□□□□ 0.39
GRIK1P39086 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.48■□□□□ 0.39
GRIK1P39086 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.48■□□□□ 0.39
GRIK1P39086 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.48■□□□□ 0.39
GRIK1P39086 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.48■□□□□ 0.39
GRIK1P39086 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.48■□□□□ 0.39
GRIK1P39086 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.48■□□□□ 0.39
GRIK1P39086 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.48■□□□□ 0.39
GRIK1P39086 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.48■□□□□ 0.39
GRIK1P39086 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GRIK1P39086 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GRIK1P39086 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
GRIK1P39086 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.47■□□□□ 0.39
GRIK1P39086 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 MIR346-201ENST00000362234 95 ntBASIC17.47■□□□□ 0.39
GRIK1P39086 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.47■□□□□ 0.39
GRIK1P39086 CYMP-203ENST00000474680 1263 ntBASIC17.47■□□□□ 0.39
GRIK1P39086 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.47■□□□□ 0.39
GRIK1P39086 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.47■□□□□ 0.39
GRIK1P39086 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.47■□□□□ 0.39
GRIK1P39086 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.47■□□□□ 0.39
GRIK1P39086 AL355385.1-201ENST00000606123 409 ntBASIC17.47■□□□□ 0.39
GRIK1P39086 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.47■□□□□ 0.39
GRIK1P39086 AC084121.4-201ENST00000641598 221 ntBASIC17.47■□□□□ 0.39
GRIK1P39086 AF228730.8-201ENST00000642140 221 ntBASIC17.47■□□□□ 0.39
GRIK1P39086 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.47■□□□□ 0.39
GRIK1P39086 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.47■□□□□ 0.39
GRIK1P39086 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GRIK1P39086 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.47■□□□□ 0.39
GRIK1P39086 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GRIK1P39086 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GRIK1P39086 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GRIK1P39086 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GRIK1P39086 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.46■□□□□ 0.39
GRIK1P39086 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GRIK1P39086 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.46■□□□□ 0.39
GRIK1P39086 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GRIK1P39086 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GRIK1P39086 RNF216P1-203ENST00000404404 2427 ntBASIC17.46■□□□□ 0.39
GRIK1P39086 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GRIK1P39086 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GRIK1P39086 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
GRIK1P39086 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.46■□□□□ 0.39
GRIK1P39086 GPS2P2-201ENST00000430745 888 ntBASIC17.46■□□□□ 0.39
GRIK1P39086 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms