Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC092053.1-201ENST00000605787 1936 ntBASIC20.66■□□□□ 0.9
RFC4P35249 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RFC4P35249 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RFC4P35249 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RFC4P35249 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RFC4P35249 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.66■□□□□ 0.9
RFC4P35249 CROCCP4-201ENST00000457096 498 ntBASIC20.66■□□□□ 0.9
RFC4P35249 RRP7BP-205ENST00000566851 833 ntBASIC20.66■□□□□ 0.9
RFC4P35249 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.66■□□□□ 0.9
RFC4P35249 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC4P35249 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RFC4P35249 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RFC4P35249 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC4P35249 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC4P35249 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC4P35249 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC4P35249 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC4P35249 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RFC4P35249 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC4P35249 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFC4P35249 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC4P35249 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC4P35249 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RFC4P35249 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFC4P35249 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.65■□□□□ 0.9
RFC4P35249 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RFC4P35249 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.65■□□□□ 0.9
RFC4P35249 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.65■□□□□ 0.9
RFC4P35249 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.65■□□□□ 0.9
RFC4P35249 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.65■□□□□ 0.9
RFC4P35249 FAM8A2P-201ENST00000528813 1142 ntBASIC20.65■□□□□ 0.9
RFC4P35249 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.65■□□□□ 0.9
RFC4P35249 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.65■□□□□ 0.9
RFC4P35249 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RFC4P35249 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.65■□□□□ 0.9
RFC4P35249 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.65■□□□□ 0.9
RFC4P35249 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFC4P35249 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RFC4P35249 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RFC4P35249 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFC4P35249 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.65■□□□□ 0.9
RFC4P35249 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RFC4P35249 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFC4P35249 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.64■□□□□ 0.9
RFC4P35249 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFC4P35249 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFC4P35249 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
RFC4P35249 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFC4P35249 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RFC4P35249 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RFC4P35249 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC4P35249 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RFC4P35249 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RFC4P35249 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.64■□□□□ 0.89
RFC4P35249 BOLA2P3-201ENST00000404566 256 ntBASIC20.64■□□□□ 0.89
RFC4P35249 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 AL139010.1-201ENST00000454878 894 ntBASIC20.64■□□□□ 0.89
RFC4P35249 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC4P35249 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC4P35249 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.64■□□□□ 0.89
RFC4P35249 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.64■□□□□ 0.89
RFC4P35249 AC092337.1-201ENST00000568699 1129 ntBASIC20.64■□□□□ 0.89
RFC4P35249 AC015936.2-201ENST00000593177 259 ntBASIC20.64■□□□□ 0.89
RFC4P35249 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.64■□□□□ 0.89
RFC4P35249 MIR8072-201ENST00000614241 80 ntBASIC20.64■□□□□ 0.89
RFC4P35249 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RFC4P35249 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.64■□□□□ 0.89
RFC4P35249 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC4P35249 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC4P35249 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC4P35249 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC4P35249 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC4P35249 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RFC4P35249 AC008764.6-201ENST00000595909 2069 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms