Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RPA3P35244 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 EMBP1-201ENST00000458200 901 ntBASIC16.85■□□□□ 0.29
RPA3P35244 SCARNA2-201ENST00000458748 420 ntBASIC16.85■□□□□ 0.29
RPA3P35244 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.85■□□□□ 0.29
RPA3P35244 RN7SL510P-201ENST00000581311 263 ntBASIC16.85■□□□□ 0.29
RPA3P35244 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.85■□□□□ 0.29
RPA3P35244 AL356309.3-201ENST00000624132 1934 ntBASIC16.85■□□□□ 0.29
RPA3P35244 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.85■□□□□ 0.29
RPA3P35244 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RPA3P35244 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.85■□□□□ 0.29
RPA3P35244 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.85■□□□□ 0.29
RPA3P35244 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RPA3P35244 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.85■□□□□ 0.29
RPA3P35244 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
RPA3P35244 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RPA3P35244 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.84■□□□□ 0.29
RPA3P35244 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPA3P35244 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RPA3P35244 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.84■□□□□ 0.29
RPA3P35244 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.84■□□□□ 0.29
RPA3P35244 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.84■□□□□ 0.29
RPA3P35244 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.84■□□□□ 0.29
RPA3P35244 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.84■□□□□ 0.29
RPA3P35244 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.84■□□□□ 0.29
RPA3P35244 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.84■□□□□ 0.29
RPA3P35244 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.84■□□□□ 0.29
RPA3P35244 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 AF238378.1-201ENST00000526806 358 ntBASIC16.84■□□□□ 0.29
RPA3P35244 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.84■□□□□ 0.29
RPA3P35244 AL139288.1-201ENST00000623748 933 ntBASIC16.84■□□□□ 0.29
RPA3P35244 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.84■□□□□ 0.29
RPA3P35244 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.84■□□□□ 0.29
RPA3P35244 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.84■□□□□ 0.29
RPA3P35244 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.84■□□□□ 0.29
RPA3P35244 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.84■□□□□ 0.29
RPA3P35244 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.84■□□□□ 0.29
RPA3P35244 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.84■□□□□ 0.29
RPA3P35244 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.84■□□□□ 0.29
RPA3P35244 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPA3P35244 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPA3P35244 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPA3P35244 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
RPA3P35244 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.83■□□□□ 0.28
RPA3P35244 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RPA3P35244 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.83■□□□□ 0.28
RPA3P35244 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.83■□□□□ 0.28
RPA3P35244 FGFR3P6-201ENST00000457012 610 ntBASIC16.83■□□□□ 0.28
RPA3P35244 BX005266.1-201ENST00000473402 457 ntBASIC16.83■□□□□ 0.28
RPA3P35244 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.83■□□□□ 0.28
RPA3P35244 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPA3P35244 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms