Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CNGA1P29973 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.85■□□□□ 0.61
CNGA1P29973 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.85■□□□□ 0.61
CNGA1P29973 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.85■□□□□ 0.61
CNGA1P29973 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.85■□□□□ 0.61
CNGA1P29973 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CNGA1P29973 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.85■□□□□ 0.61
CNGA1P29973 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CNGA1P29973 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.85■□□□□ 0.61
CNGA1P29973 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.85■□□□□ 0.61
CNGA1P29973 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.85■□□□□ 0.61
CNGA1P29973 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.85■□□□□ 0.61
CNGA1P29973 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.85■□□□□ 0.61
CNGA1P29973 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.85■□□□□ 0.61
CNGA1P29973 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.85■□□□□ 0.61
CNGA1P29973 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNGA1P29973 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CNGA1P29973 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CNGA1P29973 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CNGA1P29973 EGFEM1P-202ENST00000431685 1563 ntBASIC18.85■□□□□ 0.61
CNGA1P29973 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.85■□□□□ 0.61
CNGA1P29973 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CNGA1P29973 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 CU639417.3-201ENST00000624240 1404 ntBASIC18.84■□□□□ 0.61
CNGA1P29973 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.84■□□□□ 0.61
CNGA1P29973 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.84■□□□□ 0.61
CNGA1P29973 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CNGA1P29973 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CNGA1P29973 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.84■□□□□ 0.61
CNGA1P29973 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.84■□□□□ 0.61
CNGA1P29973 AC142381.1-201ENST00000426099 345 ntBASIC18.84■□□□□ 0.61
CNGA1P29973 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.84■□□□□ 0.61
CNGA1P29973 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.84■□□□□ 0.61
CNGA1P29973 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.84■□□□□ 0.61
CNGA1P29973 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.84■□□□□ 0.61
CNGA1P29973 AC007967.4-201ENST00000614700 386 ntBASIC18.84■□□□□ 0.61
CNGA1P29973 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.84■□□□□ 0.61
CNGA1P29973 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CNGA1P29973 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNGA1P29973 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.84■□□□□ 0.61
CNGA1P29973 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.83■□□□□ 0.61
CNGA1P29973 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CNGA1P29973 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNGA1P29973 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.83■□□□□ 0.61
CNGA1P29973 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNGA1P29973 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.83■□□□□ 0.61
CNGA1P29973 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CNGA1P29973 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNGA1P29973 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.83■□□□□ 0.6
CNGA1P29973 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNGA1P29973 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.83■□□□□ 0.6
CNGA1P29973 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.83■□□□□ 0.6
CNGA1P29973 KRT18P34-201ENST00000488218 1270 ntBASIC18.83■□□□□ 0.6
CNGA1P29973 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.83■□□□□ 0.6
CNGA1P29973 MPDU1-223ENST00000582151 728 ntBASIC18.83■□□□□ 0.6
CNGA1P29973 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.83■□□□□ 0.6
CNGA1P29973 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.83■□□□□ 0.6
CNGA1P29973 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNGA1P29973 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CNGA1P29973 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.83■□□□□ 0.6
CNGA1P29973 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.83■□□□□ 0.6
CNGA1P29973 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNGA1P29973 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.83■□□□□ 0.6
CNGA1P29973 AC007541.1-201ENST00000570282 1469 ntBASIC18.83■□□□□ 0.6
CNGA1P29973 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.83■□□□□ 0.6
CNGA1P29973 LINC02012-201ENST00000608206 1725 ntBASIC18.83■□□□□ 0.6
CNGA1P29973 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNGA1P29973 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CNGA1P29973 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CNGA1P29973 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.82■□□□□ 0.6
CNGA1P29973 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms