Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.8■□□□□ 0.28
CCND1P24385 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 AC092053.1-201ENST00000605787 1936 ntBASIC16.8■□□□□ 0.28
CCND1P24385 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.8■□□□□ 0.28
CCND1P24385 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 SAPCD2P3-201ENST00000455031 850 ntBASIC16.8■□□□□ 0.28
CCND1P24385 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.8■□□□□ 0.28
CCND1P24385 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.8■□□□□ 0.28
CCND1P24385 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 AL355877.3-201ENST00000622820 899 ntBASIC16.8■□□□□ 0.28
CCND1P24385 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 AL135999.2-201ENST00000622438 1686 ntBASIC16.8■□□□□ 0.28
CCND1P24385 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.8■□□□□ 0.28
CCND1P24385 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.8■□□□□ 0.28
CCND1P24385 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCND1P24385 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCND1P24385 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CCND1P24385 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
CCND1P24385 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.79■□□□□ 0.28
CCND1P24385 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.79■□□□□ 0.28
CCND1P24385 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.79■□□□□ 0.28
CCND1P24385 ACTG1P4-201ENST00000425123 1122 ntBASIC16.79■□□□□ 0.28
CCND1P24385 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.79■□□□□ 0.28
CCND1P24385 SCARNA2-201ENST00000458748 420 ntBASIC16.79■□□□□ 0.28
CCND1P24385 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.79■□□□□ 0.28
CCND1P24385 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.79■□□□□ 0.28
CCND1P24385 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.79■□□□□ 0.28
CCND1P24385 AC063926.3-201ENST00000624734 5658 ntBASIC16.79■□□□□ 0.28
CCND1P24385 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCND1P24385 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.79■□□□□ 0.28
CCND1P24385 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCND1P24385 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.78■□□□□ 0.28
CCND1P24385 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CCND1P24385 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.78■□□□□ 0.28
CCND1P24385 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.78■□□□□ 0.28
CCND1P24385 MTDHP3-201ENST00000594186 672 ntBASIC16.78■□□□□ 0.28
CCND1P24385 AC008608.2-201ENST00000606089 416 ntBASIC16.78■□□□□ 0.28
CCND1P24385 IFNL4P1-201ENST00000607083 540 ntBASIC16.78■□□□□ 0.28
CCND1P24385 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCND1P24385 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.78■□□□□ 0.28
CCND1P24385 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.78■□□□□ 0.28
CCND1P24385 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.78■□□□□ 0.28
CCND1P24385 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.78■□□□□ 0.28
CCND1P24385 AC022532.1-201ENST00000624563 1728 ntBASIC16.78■□□□□ 0.28
CCND1P24385 AC093525.9-201ENST00000624961 1746 ntBASIC16.78■□□□□ 0.28
CCND1P24385 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.78■□□□□ 0.28
CCND1P24385 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms