Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
XPAP23025 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
XPAP23025 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
XPAP23025 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
XPAP23025 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.76■□□□□ 0.27
XPAP23025 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.76■□□□□ 0.27
XPAP23025 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
XPAP23025 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.76■□□□□ 0.27
XPAP23025 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
XPAP23025 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.76■□□□□ 0.27
XPAP23025 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.76■□□□□ 0.27
XPAP23025 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.76■□□□□ 0.27
XPAP23025 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.76■□□□□ 0.27
XPAP23025 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.76■□□□□ 0.27
XPAP23025 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.76■□□□□ 0.27
XPAP23025 IGHV3-62-201ENST00000520057 340 ntBASIC16.76■□□□□ 0.27
XPAP23025 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
XPAP23025 AC105339.1-204ENST00000636249 355 ntBASIC16.76■□□□□ 0.27
XPAP23025 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
XPAP23025 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.76■□□□□ 0.27
XPAP23025 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.76■□□□□ 0.27
XPAP23025 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
XPAP23025 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
XPAP23025 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.75■□□□□ 0.27
XPAP23025 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
XPAP23025 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
XPAP23025 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.75■□□□□ 0.27
XPAP23025 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
XPAP23025 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.75■□□□□ 0.27
XPAP23025 AC005237.2-201ENST00000434368 219 ntBASIC16.75■□□□□ 0.27
XPAP23025 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.75■□□□□ 0.27
XPAP23025 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.75■□□□□ 0.27
XPAP23025 KRT18P34-201ENST00000488218 1270 ntBASIC16.75■□□□□ 0.27
XPAP23025 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.75■□□□□ 0.27
XPAP23025 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
XPAP23025 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.75■□□□□ 0.27
XPAP23025 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
XPAP23025 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.75■□□□□ 0.27
XPAP23025 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
XPAP23025 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
XPAP23025 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.75■□□□□ 0.27
XPAP23025 AC005915.1-201ENST00000624912 2018 ntBASIC16.75■□□□□ 0.27
XPAP23025 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
XPAP23025 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XPAP23025 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XPAP23025 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.74■□□□□ 0.27
XPAP23025 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
XPAP23025 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XPAP23025 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
XPAP23025 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.74■□□□□ 0.27
XPAP23025 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.74■□□□□ 0.27
XPAP23025 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XPAP23025 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
XPAP23025 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.74■□□□□ 0.27
XPAP23025 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XPAP23025 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
XPAP23025 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XPAP23025 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.74■□□□□ 0.27
XPAP23025 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
XPAP23025 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
XPAP23025 KRT8P39-201ENST00000396270 1433 ntBASIC16.74■□□□□ 0.27
XPAP23025 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XPAP23025 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
XPAP23025 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
XPAP23025 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms