Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.52■□□□□ 0.08
NR4A1P22736 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.52■□□□□ 0.08
NR4A1P22736 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.52■□□□□ 0.08
NR4A1P22736 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.52■□□□□ 0.08
NR4A1P22736 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.52■□□□□ 0.08
NR4A1P22736 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NR4A1P22736 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.52■□□□□ 0.08
NR4A1P22736 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.52■□□□□ 0.08
NR4A1P22736 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NR4A1P22736 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
NR4A1P22736 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.52■□□□□ 0.08
NR4A1P22736 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.52■□□□□ 0.08
NR4A1P22736 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 MTCL1P1-201ENST00000446207 792 ntBASIC15.52■□□□□ 0.08
NR4A1P22736 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.52■□□□□ 0.08
NR4A1P22736 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
NR4A1P22736 AC012615.1-201ENST00000565797 1299 ntBASIC15.52■□□□□ 0.08
NR4A1P22736 AL139327.4-201ENST00000612362 153 ntBASIC15.52■□□□□ 0.08
NR4A1P22736 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.52■□□□□ 0.08
NR4A1P22736 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NR4A1P22736 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR4A1P22736 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
NR4A1P22736 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR4A1P22736 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR4A1P22736 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR4A1P22736 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NR4A1P22736 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.52■□□□□ 0.07
NR4A1P22736 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR4A1P22736 AC104581.4-201ENST00000623126 3052 ntBASIC15.52■□□□□ 0.07
NR4A1P22736 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR4A1P22736 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NR4A1P22736 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.51■□□□□ 0.07
NR4A1P22736 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.51■□□□□ 0.07
NR4A1P22736 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.51■□□□□ 0.07
NR4A1P22736 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 AL845331.1-201ENST00000424978 1190 ntBASIC15.51■□□□□ 0.07
NR4A1P22736 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 AC104819.1-201ENST00000504587 486 ntBASIC15.51■□□□□ 0.07
NR4A1P22736 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.51■□□□□ 0.07
NR4A1P22736 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.51■□□□□ 0.07
NR4A1P22736 CLEC4GP1-201ENST00000596555 870 ntBASIC15.51■□□□□ 0.07
NR4A1P22736 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.51■□□□□ 0.07
NR4A1P22736 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NR4A1P22736 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.51■□□□□ 0.07
NR4A1P22736 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NR4A1P22736 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR4A1P22736 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.51■□□□□ 0.07
NR4A1P22736 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR4A1P22736 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.5■□□□□ 0.07
NR4A1P22736 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR4A1P22736 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR4A1P22736 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR4A1P22736 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms