Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 ME2P1-201ENST00000426028 1970 ntBASIC17.16■□□□□ 0.34
BRAFP15056 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAFP15056 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.16■□□□□ 0.34
BRAFP15056 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAFP15056 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAFP15056 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAFP15056 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAFP15056 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAFP15056 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAFP15056 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.16■□□□□ 0.34
BRAFP15056 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAFP15056 AL135999.2-201ENST00000622438 1686 ntBASIC17.16■□□□□ 0.34
BRAFP15056 TUBB8P12-201ENST00000308911 1335 ntBASIC17.16■□□□□ 0.34
BRAFP15056 TUBB7P-202ENST00000428444 1305 ntBASIC17.16■□□□□ 0.34
BRAFP15056 TUBB8P7-204ENST00000567960 1332 ntBASIC17.16■□□□□ 0.34
BRAFP15056 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
BRAFP15056 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRAFP15056 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
BRAFP15056 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAFP15056 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRAFP15056 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.16■□□□□ 0.34
BRAFP15056 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAFP15056 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 MST1L-201ENST00000442552 2185 ntBASIC17.15■□□□□ 0.34
BRAFP15056 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.15■□□□□ 0.34
BRAFP15056 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
BRAFP15056 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.15■□□□□ 0.34
BRAFP15056 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 SPDYE21P-201ENST00000413323 827 ntBASIC17.15■□□□□ 0.34
BRAFP15056 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 AC073648.2-201ENST00000510116 352 ntBASIC17.15■□□□□ 0.34
BRAFP15056 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 AC064862.7-201ENST00000604520 867 ntBASIC17.15■□□□□ 0.34
BRAFP15056 AC025062.2-201ENST00000605477 670 ntBASIC17.15■□□□□ 0.34
BRAFP15056 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
BRAFP15056 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.15■□□□□ 0.34
BRAFP15056 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.15■□□□□ 0.34
BRAFP15056 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.15■□□□□ 0.34
BRAFP15056 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.15■□□□□ 0.34
BRAFP15056 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.15■□□□□ 0.34
BRAFP15056 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
BRAFP15056 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAFP15056 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
BRAFP15056 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.14■□□□□ 0.33
BRAFP15056 SIGLEC16-201ENST00000599858 1437 ntBASIC17.14■□□□□ 0.33
BRAFP15056 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
BRAFP15056 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 AL031284.1-201ENST00000419297 478 ntBASIC17.14■□□□□ 0.33
BRAFP15056 BX005266.1-201ENST00000473402 457 ntBASIC17.14■□□□□ 0.33
BRAFP15056 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.14■□□□□ 0.33
BRAFP15056 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
BRAFP15056 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.14■□□□□ 0.33
BRAFP15056 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
BRAFP15056 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.14■□□□□ 0.33
BRAFP15056 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.14■□□□□ 0.33
BRAFP15056 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 AC006538.1-201ENST00000567905 1585 ntBASIC17.14■□□□□ 0.33
BRAFP15056 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.14■□□□□ 0.33
BRAFP15056 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
BRAFP15056 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms