Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 AC005229.1-201ENST00000392885 409 ntBASIC19.93■□□□□ 0.78
COL11A2P13942 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.93■□□□□ 0.78
COL11A2P13942 KLF2P4-201ENST00000451959 1225 ntBASIC19.93■□□□□ 0.78
COL11A2P13942 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.93■□□□□ 0.78
COL11A2P13942 AC106760.1-201ENST00000508690 800 ntBASIC19.93■□□□□ 0.78
COL11A2P13942 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.93■□□□□ 0.78
COL11A2P13942 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.93■□□□□ 0.78
COL11A2P13942 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.93■□□□□ 0.78
COL11A2P13942 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 PP12613-201ENST00000424958 2230 ntBASIC19.93■□□□□ 0.78
COL11A2P13942 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.93■□□□□ 0.78
COL11A2P13942 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL11A2P13942 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 PCGF3-213ENST00000620529 1899 ntBASIC19.93■□□□□ 0.78
COL11A2P13942 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.93■□□□□ 0.78
COL11A2P13942 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.93■□□□□ 0.78
COL11A2P13942 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.93■□□□□ 0.78
COL11A2P13942 RN7SL399P-201ENST00000471648 279 ntBASIC19.93■□□□□ 0.78
COL11A2P13942 RNA5SP412-201ENST00000516234 123 ntBASIC19.93■□□□□ 0.78
COL11A2P13942 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.93■□□□□ 0.78
COL11A2P13942 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 AC244669.2-201ENST00000612320 853 ntBASIC19.93■□□□□ 0.78
COL11A2P13942 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
COL11A2P13942 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL11A2P13942 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.93■□□□□ 0.78
COL11A2P13942 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL11A2P13942 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.92■□□□□ 0.78
COL11A2P13942 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.92■□□□□ 0.78
COL11A2P13942 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.92■□□□□ 0.78
COL11A2P13942 AC060834.1-201ENST00000443027 2032 ntBASIC19.92■□□□□ 0.78
COL11A2P13942 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL11A2P13942 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
COL11A2P13942 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.92■□□□□ 0.78
COL11A2P13942 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.92■□□□□ 0.78
COL11A2P13942 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL11A2P13942 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL11A2P13942 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.92■□□□□ 0.78
COL11A2P13942 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.92■□□□□ 0.78
COL11A2P13942 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.92■□□□□ 0.78
COL11A2P13942 AC104596.2-201ENST00000512793 793 ntBASIC19.92■□□□□ 0.78
COL11A2P13942 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
COL11A2P13942 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.92■□□□□ 0.78
COL11A2P13942 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL11A2P13942 AL391256.1-201ENST00000443260 1855 ntBASIC19.92■□□□□ 0.78
COL11A2P13942 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.92■□□□□ 0.78
COL11A2P13942 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A2P13942 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A2P13942 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.91■□□□□ 0.78
COL11A2P13942 FAM21FP-201ENST00000426241 1131 ntBASIC19.91■□□□□ 0.78
COL11A2P13942 RPL7P3-201ENST00000441388 714 ntBASIC19.91■□□□□ 0.78
COL11A2P13942 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.91■□□□□ 0.78
COL11A2P13942 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.91■□□□□ 0.78
COL11A2P13942 TDH-203ENST00000531764 1110 ntBASIC19.91■□□□□ 0.78
COL11A2P13942 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.91■□□□□ 0.78
COL11A2P13942 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL11A2P13942 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.91■□□□□ 0.78
COL11A2P13942 AL049840.4-201ENST00000602422 811 ntBASIC19.91■□□□□ 0.78
COL11A2P13942 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.91■□□□□ 0.78
COL11A2P13942 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
COL11A2P13942 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL11A2P13942 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A2P13942 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.91■□□□□ 0.78
COL11A2P13942 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms